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GATB protein (Zea mays) - STRING interaction network
"GATB" - Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATBGlutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily (546 aa)    
Predicted Functional Partners:
pco136522
Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln) (544 aa)
  0.999
GRMZM2G455085_P01
annotation not available (425 aa)
   
  0.995
GRMZM2G062268_P01
Uncharacterized protein (219 aa)
   
  0.995
pco071008b
Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln); Belongs to the GatC family (145 aa)
     
 
  0.995
100384731
Amidase 1 (444 aa)
 
 
  0.988
100285944
Glutaminyl-tRNA synthetase ; Belongs to the class-I aminoacyl-tRNA synthetase family (796 aa)
   
  0.987
pco123869
Asparaginyl-tRNA synthetase, cytoplasmic 3 (565 aa)
   
  0.985
GRMZM2G023023_P01
Fatty acid amide hydrolase (326 aa)
 
 
  0.979
GRMZM2G053466_P03
Fatty acid amide hydrolase (610 aa)
 
 
  0.978
GRMZM2G443495_P05
Fatty acid amide hydrolase (610 aa)
 
 
  0.978
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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