STRINGSTRING
100383017 protein (Zea mays) - STRING interaction network
"100383017" - PRP38 family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100383017PRP38 family protein (422 aa)    
Predicted Functional Partners:
GRMZM5G810275_P01
Pinin/SDK/memA/ protein conserved region containing protein (411 aa)
     
        0.834
GRMZM2G177438_P02
annotation not available (731 aa)
     
        0.834
100191788
Protein-protein interaction regulator family protein (312 aa)
     
        0.834
103643327
annotation not available (747 aa)
     
        0.833
103653436
Splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein (882 aa)
     
     
0.833
GRMZM2G442244_P01
Pentatricopeptide repeat-containing protein mitochondrial (794 aa)
     
      0.642
GRMZM2G146190_P01
Uncharacterized protein (555 aa)
     
      0.642
GRMZM2G151236_P03
Protein kinase superfamily protein (913 aa)
     
      0.636
103650321
annotation not available (953 aa)
     
      0.636
103634790
Uncharacterized protein (187 aa)
     
      0.636
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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