STRINGSTRING
Zm.526 protein (Zea mays) - STRING interaction network
"Zm.526" - Hypothetical protein LOC541826 in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.526Hypothetical protein LOC541826 (603 aa)    
Predicted Functional Partners:
Zm.30518
Ubiquitin carboxyl-terminal hydrolase 22 (563 aa)
     
      0.865
GRMZM2G093325_P04
Hypothetical protein LOC100277865 (218 aa)
       
      0.865
met1
DNA methyl transferase1 (1536 aa)
       
  0.782
dmt101
Cytosine-specific methyltransferase (EC 2.1.1.37) (1536 aa)
       
  0.782
c2h3
Hypothetical protein LOC100274444 (513 aa)
       
  0.753
GRMZM5G895991_P01
Hypothetical protein LOC100217081 (543 aa)
           
  0.720
IDP310
Hypothetical protein LOC100193777 (543 aa)
           
  0.720
Zm.30080
Protein LATERAL ROOT PRIMORDIUM 1 (360 aa)
           
  0.720
Zm.78709
LOC100282361 ; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex functions in docking export- [...] (112 aa)
       
      0.718
GRMZM2G329181_P03
Hypothetical protein LOC100191430 (464 aa)
       
      0.718
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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