STRINGSTRING
Zm.2140 protein (Zea mays) - STRING interaction network
"Zm.2140" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.2140Uncharacterized protein (425 aa)    
Predicted Functional Partners:
GRMZM5G880508_P01
Uncharacterized LOC103632203 (829 aa)
       
  0.780
Zm.12980
Activating signal cointegrator 1 complex subunit 3 (181 aa)
       
    0.671
GRMZM5G857708_P01
Uncharacterized protein (57 aa)
       
    0.671
GRMZM2G346278_P02
Hypothetical protein LOC100278596 (1201 aa)
       
    0.671
GRMZM2G700206_P01
Annotation not available (131 aa)
       
      0.663
GRMZM2G539821_P01
Uncharacterized protein (398 aa)
       
      0.663
GRMZM2G109753_P01
Scramblase family protein (331 aa)
       
      0.663
AC208341.4_FGP008
Uncharacterized protein (268 aa)
       
      0.663
GRMZM5G827364_P01
Annotation not available (489 aa)
       
      0.641
GRMZM2G163329_P01
Annotation not available (167 aa)
       
      0.641
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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