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STRINGSTRING
pco089119 protein (Zea mays) - STRING interaction network
"pco089119" - Rhomboid-like protein 15 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco089119Rhomboid-like protein 15 (396 aa)    
Predicted Functional Partners:
100283596
Rhomboid family protein (273 aa)
           
  0.805
tfIIB1
Transcription initiation factor1; TFIIB protein (583 aa)
           
  0.804
100282647
Protease Do-like 5; Uncharacterized protein (309 aa)
           
  0.802
100193065
Putative zinc metalloprotease EGY2 chloroplastic (549 aa)
           
  0.800
100283096
Seed maturation protein (243 aa)
       
      0.762
100217189
Reticulon-like protein (255 aa)
       
      0.762
GRMZM2G171716_P01
Membrane protein; Uncharacterized protein (321 aa)
           
  0.747
tdsgR91H11
annotation not available (528 aa)
     
 
  0.730
100192818
Cell division control protein 48 homolog B; Belongs to the AAA ATPase family (568 aa)
     
 
  0.729
100193785
AAA-type ATPase family protein / ankyrin repeat family protein (485 aa)
       
 
  0.727
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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