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Zm.93898 protein (Zea mays) - STRING interaction network
"Zm.93898" - Aminotransferase y4uB in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.93898Aminotransferase y4uB (509 aa)    
Predicted Functional Partners:
GRMZM2G128114_P01
Succinate semialdehyde dehydrogenase (521 aa)
   
 
  0.967
gpm277
Hypothetical protein LOC100191549 (493 aa)
         
  0.937
GRMZM2G098875_P01
Hypothetical protein LOC100381655 (490 aa)
         
  0.937
Zm.12256
2-hydroxy-3-oxopropionate reductase (295 aa)
         
  0.934
GRMZM5G846394_P01
Annotation not available (75 aa)
   
 
  0.916
GRMZM5G832664_P01
Annotation not available (75 aa)
   
 
  0.916
Zm.18363
LOC100194297 (cl765_1), mRNA (336 aa)
   
 
  0.916
GRMZM2G116696_P01
Putative uncharacterized protein (75 aa)
   
 
  0.916
cl765_1
Biotin synthase (386 aa)
   
 
  0.916
GRMZM2G355906_P03
Hypothetical protein LOC100273302 (1618 aa)
         
  0.905
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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