STRINGSTRING
cl173_1a protein (Zea mays) - STRING interaction network
"cl173_1a" - LOC100283677 in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl173_1aLOC100283677 (399 aa)    
Predicted Functional Partners:
GRMZM2G106263_P01
hydroxymethylglutaryl-CoA synthase (464 aa)
         
  0.957
GRMZM2G087207_P01
Hypothetical protein LOC100384769 (465 aa)
         
  0.957
pco130633
Hypothetical protein LOC100272824 (470 aa)
         
  0.957
GRMZM2G094655_P01
methylglutaconyl-CoA hydratase (302 aa)
   
 
  0.947
GRMZM5G866758_P02
acetyl-CoA acetyltransferase, cytosolic 1 (401 aa)
   
 
  0.913
GRMZM5G860137_P01
Hypothetical protein LOC100274017 (421 aa)
   
 
  0.913
GRMZM5G848768_P02
Hypothetical protein LOC100192501 (461 aa)
   
 
  0.913
Zm.16489
Putative uncharacterized protein (401 aa)
   
 
  0.913
GRMZM2G382171_P01
Uncharacterized protein (241 aa)
   
  0.902
Zm.78158
3-isopropylmalate dehydratase large subunit 2 (505 aa)
   
  0.902
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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