STRINGSTRING
Zm.8709 protein (Zea mays) - STRING interaction network
"Zm.8709" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.8709Uncharacterized protein (545 aa)    
Predicted Functional Partners:
GRMZM5G814549_P01
Hypothetical protein LOC100279548 (528 aa)
           
  0.545
GRMZM2G154242_P01
Annotation not available (55 aa)
           
  0.534
crp1
Chloroplast RNA processing1 (668 aa)
           
  0.457
GRMZM2G062591_P02
Hypothetical protein LOC100272943 (391 aa)
           
  0.455
SPP1
Sucrose-phosphatase 1 (ZmSPP1)(EC 3.1.3.24); Catalyzes the final step of sucrose synthesis. Inactive with fructose 6-phosphate as substrate (425 aa)
           
  0.433
GRMZM2G060564_P01
Hypothetical protein LOC100381408 (367 aa)
           
  0.424
GRMZM2G118644_P01
Hypothetical protein LOC100277447 (155 aa)
           
  0.408
nad4
NADH dehydrogenase subunit 4 (495 aa)
           
  0.405
Zm.17711
Probable LRR receptor-like serine/threonine-protein kinase At1g63430-like (540 aa)
           
  0.400
Zm.24653
Hypothetical protein LOC100279336 (LOC100279336), mRNA (674 aa)
           
  0.400
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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