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STRINGSTRING
umc1347 protein (Zea mays) - STRING interaction network
"umc1347" - Exonuclease domain-containing protein 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1347Exonuclease domain-containing protein 1 (436 aa)    
Predicted Functional Partners:
100279204
Dicer-like 104; Belongs to the helicase family. Dicer subfamily (595 aa)
       
 
  0.599
dcl102
annotation not available (1517 aa)
       
 
  0.599
100192986
Dicer-like 105; Belongs to the helicase family. Dicer subfamily (707 aa)
       
 
  0.599
dcl103
Dicer-like 103 (306 aa)
       
 
  0.599
GRMZM2G153627_P01
annotation not available (251 aa)
       
 
  0.599
100382363
Putative metallophosphoesterase (533 aa)
       
 
  0.599
cl13380_1
RNAse II-like 1 (329 aa)
       
 
  0.599
103650901
annotation not available (824 aa)
       
 
  0.599
AY110113
Ubiquitin fusion degradation UFD1 family protein (567 aa)
       
 
  0.599
GRMZM2G050882_P01
Dicer-like 103 (237 aa)
       
 
  0.599
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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