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STRINGSTRING
TCP40 protein (Zea mays) - STRING interaction network
"TCP40" - Transcription factor TCP6 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCP40Transcription factor TCP6 (176 aa)    
Predicted Functional Partners:
100281134
Transcription factor TCP4; Mutant cincinnata (565 aa)
       
 
  0.580
100272316
T-complex protein 1 subunit alpha; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (545 aa)
           
  0.545
pco140702
T-complex protein 1 subunit alpha; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (545 aa)
           
  0.545
GRMZM2G161988_P01
SFT2 domain containing 2; Uncharacterized protein (165 aa)
           
  0.539
100193749
Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex (174 aa)
           
  0.539
S1FA
DNA-binding protein S1FA; DNA-binding protein that specifically recognizes a negative element (S1F) within the RPS1 promoter (80 aa)
           
  0.532
mp1
Uncharacterized protein; WD40 repeat protein (416 aa)
           
  0.517
GRMZM2G326116_P01
annotation not available (312 aa)
       
      0.474
ial1
Protein IAL1 (270 aa)
           
  0.459
LBD6
LOB domain-containing protein 6; Promotes the switch from proliferation to differentiation in the embryo sac. Negative regulator of cell proliferation in the adaxial side of leaves. Regulates the formation of a symmetric lamina and the establishment of venation. Interacts directly with RS2 (rough sheath 2) to repress some knox homeobox genes (260 aa)
           
  0.459
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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