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STRINGSTRING
100272422 protein (Zea mays) - STRING interaction network
"100272422" - Cleavage and polyadenylation specificity factor in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100272422Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (1229 aa)    
Predicted Functional Partners:
GRMZM2G316232_P01
110 kDa U5 small nuclear ribonucleoprotein component CLO; Putative translation elongation/initiation factor family protein (525 aa)
     
 
  0.984
GRMZM2G093987_P01
110 kDa U5 small nuclear ribonucleoprotein component CLO; Putative translation elongation factor family protein (371 aa)
     
 
  0.984
GRMZM2G125151_P01
Uncharacterized protein (686 aa)
     
 
  0.978
100277544
Splicing factor 3B subunit 1 (1280 aa)
     
 
  0.977
GRMZM2G117346_P01
Splicing factor 3B subunit 1 (1280 aa)
     
 
  0.977
GRMZM2G307567_P01
Uncharacterized protein (1364 aa)
     
 
  0.975
GRMZM2G023471_P01
Uncharacterized protein (1044 aa)
     
 
  0.966
103629533
Pre-mRNA-processing-splicing factor 8A (2366 aa)
     
 
  0.954
GRMZM2G175804_P01
annotation not available (155 aa)
     
 
  0.954
103638016
Pre-mRNA-processing-splicing factor 8A (2363 aa)
     
 
  0.954
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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