STRINGSTRING
sbp27 protein (Zea mays) - STRING interaction network
"sbp27" - Hypothetical protein LOC100279234 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sbp27Hypothetical protein LOC100279234 (479 aa)    
Predicted Functional Partners:
GRMZM2G149952_P01
Putative uncharacterized protein (487 aa)
           
  0.721
GRMZM2G131489_P01
Hypothetical protein LOC100274085 (315 aa)
           
  0.721
Zm.95122
ATP sulfurylase (489 aa)
           
  0.721
GRMZM2G145101_P02
Carbonic anhydrase ; Reversible hydration of carbon dioxide (324 aa)
           
  0.720
GRMZM2G121878_P03
Carbonic anhydrase (456 aa)
           
  0.622
br2
Hypothetical protein LOC100384057 (1379 aa)
           
  0.465
gras31
Hypothetical protein LOC100382187 (721 aa)
           
  0.410
GRAS80
Hypothetical protein LOC100279263 (708 aa)
           
  0.410
GRAS33
Hypothetical protein LOC100274201 (LOC100274201), mRNA (645 aa)
           
  0.410
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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