STRINGSTRING
TIDP3406 protein (Zea mays) - STRING interaction network
"TIDP3406" - LOC100285808 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIDP3406LOC100285808 (362 aa)    
Predicted Functional Partners:
GRMZM2G099729_P01
Hypothetical protein LOC100384459 (266 aa)
   
 
  0.974
GRMZM2G496833_P01
Annotation not available (124 aa)
       
  0.926
GRMZM2G163809_P02
Prenyl transferase (420 aa)
       
  0.926
pco077228
Geranylgeranyl hydrogenase (457 aa)
   
 
    0.911
GRMZM2G433002_P01
Hypothetical protein LOC100384334 (710 aa)
   
 
  0.805
bsd2
Bundle sheath defective2 (129 aa)
     
        0.800
GRMZM2G169405_P01
Hypothetical protein LOC100304093 (197 aa)
     
        0.780
GRMZM2G442804_P03
Hypothetical protein LOC100193465 (356 aa)
       
  0.753
GRMZM2G438673_P01
Ubiquinone biosynthesis methyltransferase COQ5 (302 aa)
       
  0.753
GRMZM2G128648_P03
Hypothetical protein LOC100383639 (305 aa)
       
  0.753
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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