STRINGSTRING
Zm.28048 protein (Zea mays) - STRING interaction network
"Zm.28048" - Splicing factor, arginine/serine-rich 7 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.28048Splicing factor, arginine/serine-rich 7 (196 aa)    
Predicted Functional Partners:
GRMZM5G812921_P01
Protein binding protein (LOC100280668), mRNA (492 aa)
     
    0.875
Zm.85140
Hypothetical protein LOC100278811 ; Probable pre-rRNA processing protein involved in ribosome biogenesis (272 aa)
       
      0.868
pco134259
LOC100285671 (552 aa)
     
  0.860
Zm.116649
Uncharacterized protein (406 aa)
     
    0.835
GRMZM2G101689_P01
Hypothetical protein LOC100279862 (525 aa)
     
    0.824
GRMZM2G095095_P01
Annotation not available (122 aa)
     
    0.824
GRMZM2G494600_P01
Uncharacterized protein (487 aa)
     
 
    0.755
Zm.22762
RNA-binding protein 25-like (747 aa)
       
      0.681
Zm.86426
RNA-binding protein 25-like (882 aa)
       
      0.681
GRMZM2G373447_P01
Uncharacterized protein (507 aa)
     
 
    0.634
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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