STRINGSTRING
Zm.88027 protein (Zea mays) - STRING interaction network
"Zm.88027" - Nucleotide binding protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.88027Nucleotide binding protein (481 aa)    
Predicted Functional Partners:
Zm.110075
Anaphase-promoting complex subunit 6-like (589 aa)
       
  0.858
GRMZM2G147603_P02
Hypothetical protein LOC100273613 (580 aa)
       
  0.858
GRMZM2G126197_P01
Zinc finger CCCH domain-containing protein 45-like (246 aa)
     
 
  0.842
Zm.127137
Zinc finger CCCH domain-containing protein 45-like (251 aa)
     
 
  0.842
Zm.22716
Uncharacterized LOC103638749 (1192 aa)
     
 
  0.842
GRMZM2G168752_P01
Set1 complex component swd2 (318 aa)
   
 
 
  0.838
GRMZM2G032260_P02
Hypothetical protein LOC100273578 (327 aa)
   
 
 
  0.838
cl24641_1
Hypothetical protein LOC100280358 (336 aa)
   
 
 
  0.828
Zm.36620
Uncharacterized LOC103646346 (892 aa)
     
  0.818
GRMZM2G079723_P01
Uncharacterized protein (267 aa)
   
 
 
  0.813
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (7%) [HD]