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umc1511 protein (Zea mays) - STRING interaction network
"umc1511" - Serine/arginine-rich splicing factor RS2Z32 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1511Serine/arginine-rich splicing factor RS2Z32 (314 aa)    
Predicted Functional Partners:
LOC542179
U1 snRNP (491 aa)
     
 
  0.916
srp32
ASF/SF2-like pre-mRNA splicing factor SRP32 (285 aa)
     
 
0.895
AY109715
Serine/arginine-rich SC35-like splicing factor SCL30 (83 aa)
     
 
  0.882
GRMZM2G065066_P01
Serine/arginine-rich SC35-like splicing factor SCL30 (160 aa)
     
 
  0.882
GRMZM2G065298_P02
annotation not available (169 aa)
     
 
  0.878
100383636
Serine/arginine-rich splicing factor SC35 (246 aa)
     
 
0.866
gpm624
Spliceosome RNA helicase BAT1 isoform 1; Spliceosome RNA helicase BAT1 isoform 2; Spliceosome RNA helicase BAT1 isoform 3 (429 aa)
     
 
  0.860
GRMZM2G088218_P03
DEAD-box ATP-dependent RNA helicase 56 (446 aa)
     
 
  0.860
TIDP3541
Serine/arginine-rich splicing factor SC35 (283 aa)
     
 
0.857
TIDP3152
Serine/arginine-rich splicing factor SC35 (251 aa)
     
 
0.855
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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