STRINGSTRING
Zm.40971 protein (Zea mays) - STRING interaction network
"Zm.40971" - DEAD-box ATP-dependent RNA helicase 36 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.40971DEAD-box ATP-dependent RNA helicase 36 (417 aa)    
Predicted Functional Partners:
GRMZM2G060817_P02
Hypothetical protein LOC100191510 (885 aa)
     
  0.994
Zm.36135
Uncharacterized LOC103627634 (530 aa)
     
 
  0.989
Zm.27527
Uncharacterized LOC103648038 (825 aa)
     
 
  0.989
GRMZM2G056142_P01
Annotation not available (251 aa)
     
 
  0.989
AC212564.2_FGP001
Annotation not available (83 aa)
     
 
  0.989
GRMZM5G811567_P01
Uncharacterized protein (414 aa)
   
 
0.987
pco061701
Hypothetical protein LOC100274326 (461 aa)
     
  0.987
GRMZM2G083580_P02
Hypothetical protein LOC100383059 (541 aa)
   
 
0.987
Zm.73774
Hypothetical protein LOC100193563 (556 aa)
     
 
  0.986
GRMZM2G449297_P01
Annotation not available (106 aa)
     
        0.986
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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