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STRINGSTRING
100191267 protein (Zea mays) - STRING interaction network
"100191267" - Acclimation of photosynthesis to environment in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100191267Acclimation of photosynthesis to environment (261 aa)    
Predicted Functional Partners:
GRMZM2G079759_P01
Rubredoxin family protein (346 aa)
     
        0.963
GRMZM2G306732_P01
Fructose-1,6-bisphosphatase ; Belongs to the FBPase class 1 family (413 aa)
     
        0.960
100284837
Quinone oxidoreductase-like protein At1g23740 (386 aa)
     
        0.960
pco080036b
ATP synthase B chain ; Belongs to the ATPase B chain family (216 aa)
     
        0.958
100194053
Thylakoid lumenal protein TL20.3 chloroplastic (268 aa)
     
        0.958
100285301
Rieske domain containing protein (370 aa)
     
        0.958
103631990
annotation not available (340 aa)
     
        0.955
GRMZM2G085153_P02
Aldo-keto reductase/ oxidoreductase (409 aa)
     
        0.947
mdh6
Malate dehydrogenase [NADP], chloroplastic; The chloroplastic, NADP-dependent form is essential for the photosynthesis C4 cycle, which allows plants to circumvent the problem of photorespiration. In C4 plants, NADP-MDH activity acts to convert oxaloacetate to malate in chloroplasts of mesophyll cells for transport to the bundle sheath cells (432 aa)
     
        0.945
TAB2
Protein TAB2 homolog, chloroplastic; Nuclear genome-encoded factor involved in the biogenesis of photosystem I (PSI). Required for the accumulation of PSI during plant development. Does not seem to be required for the translation of mRNAs of the PSI subunits (390 aa)
   
        0.939
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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