STRINGSTRING
APE1 protein (Zea mays) - STRING interaction network
"APE1" - Hypothetical protein LOC100191267 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE1Hypothetical protein LOC100191267 (261 aa)    
Predicted Functional Partners:
GRMZM2G081955_P01
Tab2 protein (390 aa)
   
        0.672
pco095664
Hypothetical protein LOC100279441 (335 aa)
   
        0.660
pco092382
LOC100282845 (405 aa)
   
        0.657
Zm.117930
Hypothetical protein LOC100279820 (582 aa)
   
        0.656
pco080036b
LOC100282566 (216 aa)
   
        0.637
Zm.15058
LOC100285398 (290 aa)
   
        0.626
Zm.67895
Hypothetical protein LOC100194317 (175 aa)
   
        0.618
FTRC
Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic Precursor (FTR-C)(EC 1.18.-.-)(Ferredoxin-thioredoxin reductase subunit B)(FTR-B); Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin (152 aa)
   
        0.607
Zm.27135
Uncharacterized LOC103631990 (340 aa)
     
        0.602
pco144630
Hypothetical protein LOC100277981 (205 aa)
   
        0.599
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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