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Zm.21080 protein (Zea mays) - STRING interaction network
"Zm.21080" - Tonoplast dicarboxylate transporter in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.21080Tonoplast dicarboxylate transporter (549 aa)    
Predicted Functional Partners:
cl29771_2
LOC100284246 (475 aa)
       
      0.677
GRMZM2G157317_P03
Hypothetical protein LOC100273971 (473 aa)
       
      0.677
GRMZM2G092780_P01
Hypothetical protein LOC100382112 ; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport (577 aa)
     
 
  0.530
GRMZM2G020388_P01
Uncharacterized protein (77 aa)
     
 
  0.530
GRMZM2G111411_P01
Ran-binding protein 1 (221 aa)
       
      0.454
GRMZM2G094388_P01
Hypothetical protein LOC100193549 (209 aa)
       
      0.454
Zm.87138
LOC100284131 (210 aa)
       
      0.454
Zm.94010
Ran-binding protein 1 (220 aa)
       
      0.454
GRMZM5G895554_P05
Hypothetical protein LOC100276991 ; Catalyzes the synthesis of activated sulfate (270 aa)
              0.448
cl1019_1
Hypothetical protein LOC100193315 ; Catalyzes the synthesis of activated sulfate (275 aa)
              0.448
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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