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Zm.8650 protein (Zea mays) - STRING interaction network
"Zm.8650" - DCL protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.8650DCL protein (188 aa)    
Predicted Functional Partners:
bhlh77
Putative transcription factor bHLH041 (413 aa)
           
  0.721
Zm.10391
Small RNA 2’-O-methyltransferase (931 aa)
           
  0.721
mrpi2
Nucleic acid binding protein (505 aa)
           
  0.525
mrpi1
C2H2 zinc finger protein (501 aa)
           
  0.523
bsd2
Bundle sheath defective2 (129 aa)
     
        0.406
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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