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STRINGSTRING
pco109284 protein (Zea mays) - STRING interaction network
"pco109284" - RNA binding (RRM/RBD/RNP motifs) family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco109284RNA binding (RRM/RBD/RNP motifs) family protein (257 aa)    
Predicted Functional Partners:
GRMZM2G096228_P01
Caltractin (179 aa)
       
      0.668
100284444
Caltractin1; Caltractin; Uncharacterized protein (172 aa)
       
      0.668
add1
Putative serine/threonine-protein phosphatase 2A regulatory subunit B’’ subunit TON2; Alternative discordia1 (205 aa)
           
  0.580
103641393
Discordia 1; Discordia1 (484 aa)
           
  0.580
GRMZM2G050800_P01
annotation not available (375 aa)
           
  0.580
100383238
Sequence-specific DNA binding transcription factor (908 aa)
           
  0.544
100381625
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (747 aa)
           
  0.533
GRMZM2G011233_P01
Thioredoxin superfamily protein (237 aa)
           
  0.528
103633476
annotation not available (1982 aa)
           
  0.513
103633403
annotation not available (1039 aa)
       
 
  0.501
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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