STRINGSTRING
umc1359 protein (Zea mays) - STRING interaction network
"umc1359" - Hydrophobic protein LTI6B in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1359Hydrophobic protein LTI6B (57 aa)    
Predicted Functional Partners:
GRMZM2G181378_P01
Hypothetical protein LOC100279774 (871 aa)
       
 
  0.604
GRMZM2G080439_P01
Putative uncharacterized protein (880 aa)
       
 
  0.604
C2H133
Hypothetical protein LOC100193305 (354 aa)
       
 
  0.402
Zm.32364
Hypothetical protein LOC100304401 (599 aa)
       
 
  0.402
Zm.147617
Zinc finger protein ZAT6-like (178 aa)
       
 
  0.402
GRMZM5G828179_P01
Uncharacterized protein (354 aa)
       
 
  0.402
GRMZM5G804618_P01
Zinc finger, C2H2 type family protein (LOC100284942), mRNA (225 aa)
       
 
  0.402
GRMZM2G702253_P02
Uncharacterized protein (351 aa)
       
 
  0.402
c2h5
Uncharacterized protein (381 aa)
       
 
  0.402
Zm.126628
Protein SHOOT GRAVITROPISM 5 (452 aa)
       
 
  0.402
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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