STRINGSTRING
GNAT16 protein (Zea mays) - STRING interaction network
"GNAT16" - Hypothetical protein LOC100216833 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GNAT16Hypothetical protein LOC100216833 (570 aa)    
Predicted Functional Partners:
GRMZM2G042371_P01
Hypothetical protein LOC100193176 (717 aa)
     
  0.990
IDP267
Hypothetical protein LOC100193043 ; Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (1334 aa)
     
  0.988
AI812156
Hypothetical protein LOC100192820 (375 aa)
     
  0.984
GCN5
Histone acetyl transferase GNAT/MYST 101 (515 aa)
     
 
  0.941
Zm.96576
Hypothetical protein LOC100278925 (309 aa)
     
 
  0.914
Zm.118625
Hypothetical protein LOC100194368 (525 aa)
     
        0.842
Zm.5801
Hypothetical protein LOC100275802 (415 aa)
     
        0.842
GRMZM2G134844_P01
Putative uncharacterized protein (525 aa)
     
        0.842
Zm.37903
Uncharacterized protein (452 aa)
     
        0.842
GRMZM2G402242_P01
Hypothetical protein LOC100193637 (386 aa)
     
 
  0.807
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (10%) [HD]