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STRINGSTRING
CL11475_1 protein (Zea mays) - STRING interaction network
"CL11475_1" - Vacuolar protein sorting-associated protein 20 homolog 2 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL11475_1Vacuolar protein sorting-associated protein 20 homolog 2; Belongs to the SNF7 family (285 aa)    
Predicted Functional Partners:
100283903
Vacuolar protein sorting protein 25 (177 aa)
     
 
  0.979
GRMZM2G126860_P01
Vacuolar sorting protein 4b ; Belongs to the AAA ATPase family (522 aa)
     
 
  0.966
GRMZM2G088834_P03
Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1; Belongs to the AAA ATPase family (435 aa)
       
 
  0.962
100216977
Vacuolar protein sorting-associated protein; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs (252 aa)
     
 
  0.956
GRMZM2G148586_P01
Uncharacterized protein; Vacuolar protein sorting protein 36 (446 aa)
     
 
  0.927
GRMZM2G117022_P01
annotation not available (443 aa)
     
 
  0.927
GRMZM2G381649_P01
Vacuolar protein sorting-associated protein 32 homolog 1; Belongs to the SNF7 family (228 aa)
     
 
  0.914
100216894
Vacuolar protein sorting-associated protein 24 homolog 1; Belongs to the SNF7 family (229 aa)
     
 
  0.904
100273289
Vacuolar protein sorting-associated protein 24 homolog 1; Belongs to the SNF7 family (240 aa)
     
 
  0.904
GRMZM2G388834_P02
ATP-dependent DNA helicase; Putative peptidase C48 domain family protein ; Belongs to the helicase family (1344 aa)
     
 
  0.900
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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