STRINGSTRING
pco073425a protein (Zea mays) - STRING interaction network
"pco073425a" - Bet1-like SNARE 1-1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco073425aBet1-like SNARE 1-1 (236 aa)    
Predicted Functional Partners:
pco069725
Membrin; Involved in transport of proteins from the cis/medial- Golgi to the trans-Golgi network (237 aa)
     
  0.999
100192511
Syntaxin-32; Belongs to the syntaxin family (343 aa)
     
  0.995
103644161
annotation not available (218 aa)
     
  0.994
100272807
25.3 kDa vesicle transport protein; Uncharacterized protein ; Belongs to the synaptobrevin family (218 aa)
     
  0.994
GRMZM2G092704_P01
Uncharacterized protein (196 aa)
     
 
  0.978
103636448
VAMP-like protein YKT62; Histone H3 ; Belongs to the synaptobrevin family (359 aa)
     
 
  0.978
GRMZM2G178244_P01
Uncharacterized protein; VAMP-like protein YKT62 ; Belongs to the synaptobrevin family (274 aa)
     
 
  0.978
AC187910.5_FGP002
25.3 kDa vesicle transport protein; Belongs to the synaptobrevin family (166 aa)
     
 
  0.974
GRMZM2G165788_P01
annotation not available (382 aa)
     
 
  0.970
AC203966.5_FGP006
annotation not available (248 aa)
     
 
  0.969
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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