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cl53957_1a protein (Zea mays) - STRING interaction network
"cl53957_1a" - Hypothetical protein LOC100216708 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl53957_1aHypothetical protein LOC100216708 (384 aa)    
Predicted Functional Partners:
GRMZM2G061988_P01
Hypothetical protein LOC100381809 (791 aa)
     
  0.981
GRMZM2G175434_P01
Annotation not available (195 aa)
     
  0.978
GRMZM2G150209_P02
mRNA decapping enzyme 2 (322 aa)
     
  0.978
GRMZM2G051756_P01
Uncharacterized protein (197 aa)
     
  0.978
GRMZM2G458401_P01
Uncharacterized protein (893 aa)
     
  0.975
GRMZM2G157685_P01
Annotation not available (71 aa)
     
  0.975
Zm.22395
Uncharacterized protein (1066 aa)
     
  0.975
GRMZM2G099630_P01
Hypothetical protein LOC100384297 (990 aa)
     
  0.975
GRMZM2G064868_P03
Putative uncharacterized protein (1079 aa)
     
  0.975
Zm.147920
5’-3’ exoribonuclease 4-like (795 aa)
     
  0.975
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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