STRINGSTRING
Zm.118006 protein (Zea mays) - STRING interaction network
"Zm.118006" - pnFL-2 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.118006pnFL-2 (237 aa)    
Predicted Functional Partners:
zim33
Hypothetical protein LOC100274370 (180 aa)
     
 
0.935
pco139385c
Hypothetical protein LOC100273108 (404 aa)
     
 
0.924
ZIM34
Hypothetical protein LOC100383759 (230 aa)
     
 
0.917
ZIM32
Hypothetical protein LOC100384736 (216 aa)
     
 
0.912
Zm.149954
ZIM motif family protein (426 aa)
     
 
0.904
ZIM15
ZIM motif family protein (391 aa)
     
 
0.902
GRMZM2G159293_P01
Annotation not available (173 aa)
     
   
0.893
zim7
Uncharacterized protein (155 aa)
     
      0.893
Zm.7143
Transcription factor MYC7E Fragment (705 aa)
     
 
  0.873
GRMZM2G353209_P01
Hypothetical protein LOC100280173 (599 aa)
       
  0.836
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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