STRINGSTRING
umc2110 protein (Zea mays) - STRING interaction network
"umc2110" - Heterogeneous nuclear ribonucleoprotein R in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc2110Heterogeneous nuclear ribonucleoprotein R (506 aa)    
Predicted Functional Partners:
crd101
Chromdomain-containing protein CRD101 (380 aa)
     
 
  0.803
Zm.9461
Hypothetical protein LOC100193418 (306 aa)
       
  0.800
GRMZM5G812921_P01
Protein binding protein (LOC100280668), mRNA (492 aa)
     
    0.689
GRMZM2G494600_P01
Uncharacterized protein (487 aa)
     
 
    0.663
ms45
Hypothetical protein LOC100273898 (323 aa)
       
    0.662
GRMZM2G100620_P01
Hypothetical protein LOC100272589 (317 aa)
       
    0.662
GRMZM2G034313_P01
Hypothetical protein LOC100383202 (714 aa)
     
  0.652
Zm.22882
Branchpoint-bridging protein-like (750 aa)
     
  0.652
GRMZM2G073521_P01
Hypothetical protein LOC100383283 (771 aa)
     
  0.648
GRMZM2G060977_P01
Hypothetical protein LOC100193201 (360 aa)
     
0.648
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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