STRINGSTRING
LIP protein (Zea mays) - STRING interaction network
"LIP" - Malate synthase, glyoxysomal (EC 2.3.3.9) in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIPMalate synthase, glyoxysomal (EC 2.3.3.9) (563 aa)    
Predicted Functional Partners:
Zm.145986
Putative uncharacterized protein (572 aa)
 
 
  0.998
GRMZM2G325129_P01
Annotation not available (386 aa)
     
   
  0.973
GRMZM2G135218_P01
Annotation not available (369 aa)
     
   
  0.973
pco084078
Hypothetical protein LOC100279194 (706 aa)
     
  0.971
mdh2
Hypothetical protein LOC100274264 (340 aa)
     
 
  0.965
GRMZM2G466833_P01
Hypothetical protein LOC100272900 (410 aa)
     
 
  0.963
pco143139c
Hypothetical protein LOC100193743 (394 aa)
     
 
  0.963
Zm.6655
LOC100193491 (pco104294), mRNA (228 aa)
     
 
  0.963
Zm.66713
Malate dehydrogenase, glyoxysomal (358 aa)
     
 
  0.963
GRMZM2G068455_P01
Hypothetical protein LOC100193663 (397 aa)
     
 
  0.963
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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