STRINGSTRING
Zm.21952 protein (Zea mays) - STRING interaction network
"Zm.21952" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.21952Uncharacterized protein (229 aa)    
Predicted Functional Partners:
pco101674a
LOC100282702 (227 aa)
     
  0.970
GRMZM2G084638_P01
Annotation not available (1044 aa)
     
  0.970
GRMZM2G035996_P01
Shaggy kinase homolog Fragment (881 aa)
       
 
  0.949
GRMZM2G109618_P01
Hypothetical protein LOC100273470 (344 aa)
     
  0.840
RAD51A
DNA repair protein RAD51 homolog A (Rad51-like protein A)(RAD51A)(ZmRAD51a); Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Unwinds duplex DNA (By similarity). Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination (340 aa)
     
  0.830
RAD51B
DNA repair protein RAD51 homolog B (Rad51-like protein B)(RAD51B)(ZmRAD51b); Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Unwinds duplex DNA (By similarity). Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination (340 aa)
     
  0.830
GRMZM2G471335_P01
Uncharacterized protein (258 aa)
     
  0.709
GRMZM2G453619_P01
Annotation not available (125 aa)
     
  0.709
GRMZM2G157016_P01
Uncharacterized protein (314 aa)
     
  0.709
GRMZM2G123089_P01
DNA repair protein RAD51 (308 aa)
     
  0.709
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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