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pco125364 protein (Zea mays) - STRING interaction network
"pco125364" - HVA22-like protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco125364HVA22-like protein (329 aa)    
Predicted Functional Partners:
GRMZM2G144701_P01
HVA22-like protein f (746 aa)
     
   
  0.783
103635896
Protein TRANSPORT INHIBITOR RESPONSE 1 (590 aa)
           
  0.682
100273802
Uncharacterized protein; tRNA methyltransferase catalytic subunit TRM61 (322 aa)
     
        0.655
IDP121
Nucleic acid-binding OB-fold-like protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (146 aa)
     
        0.595
107548100
Nucleic acid-binding OB-fold-like protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (142 aa)
     
        0.595
GRMZM2G101859_P01
Nucleic acid-binding OB-fold-like protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (144 aa)
     
        0.595
hk3
Histidine kinase 3 (1201 aa)
           
  0.580
HK1
Histidine kinase1 (974 aa)
           
  0.569
GRMZM2G181649_P01
Uncharacterized protein; Putative ubiquitin-conjugating enzyme family (699 aa)
     
      0.540
cl29771_2
Nuclear pore complex protein NUP50A; RanBP1 domain containing protein isoform 1; RanBP1 domain containing protein isoform 2; Uncharacterized protein (475 aa)
     
        0.539
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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