STRINGSTRING
rop5 protein (Zea mays) - STRING interaction network
"rop5" - Rho-related protein from plants 5 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rop5Rho-related protein from plants 5 (215 aa)    
Predicted Functional Partners:
GRMZM2G416552_P01
Annotation not available (802 aa)
       
  0.979
cl6595_1b
Hypothetical protein LOC100191557 (214 aa)
     
  0.974
GRMZM2G136236_P01
Hypothetical protein LOC100217248 (215 aa)
     
  0.974
Zm.29332
Rho GDP-dissociation inhibitor 1 (292 aa)
     
  0.974
GRMZM2G072089_P01
Rho GDP-dissociation inhibitor 1 (212 aa)
     
  0.974
GRMZM2G012814_P01
Uncharacterized protein (232 aa)
     
  0.974
GRMZM2G072616_P01
Annotation not available (847 aa)
       
  0.967
GRMZM2G375085_P01
Uncharacterized protein (334 aa)
     
  0.957
Zm.85658
ADP-ribosylation factor GTPase-activating protein AGD3 (837 aa)
       
  0.952
GRMZM2G095389_P01
Uncharacterized protein (580 aa)
       
  0.948
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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