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Zm.28782 protein (Zea mays) - STRING interaction network
"Zm.28782" - Pentatricopeptide repeat-containing protein At4g30825, chloroplastic-like in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.28782Pentatricopeptide repeat-containing protein At4g30825, chloroplastic-like (442 aa)    
Predicted Functional Partners:
GRMZM2G097605_P01
DNA repair helicase UVH6 (758 aa)
     
      0.999
BSD10
Hypothetical protein LOC100193949 (600 aa)
       
      0.999
Zm.14116
General transcription factor IIH subunit 4 (451 aa)
       
      0.999
pco075430a
Hypothetical protein LOC100272776 (428 aa)
       
      0.954
Zm.21536
SURF1 (344 aa)
     
   
  0.497
GRMZM2G052457_P01
Uncharacterized protein (434 aa)
       
 
  0.467
GRMZM2G059981_P01
Hypothetical protein LOC100384526 (233 aa)
       
 
  0.464
cl9751_1a
Hypothetical protein LOC100272359 (296 aa)
     
   
  0.461
Zm.37505
EMB1417 (296 aa)
     
   
  0.461
GRMZM2G058563_P01
Annotation not available (804 aa)
           
  0.459
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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