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GRMZM2G103250_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G103250_P01" - Pentatricopeptide repeat-containing protein chloroplastic in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G103250_P01Pentatricopeptide repeat-containing protein chloroplastic (442 aa)    
Predicted Functional Partners:
100304356
Pentatricopeptide repeat (PPR) superfamily protein (485 aa)
     
   
  0.950
100285960
DNA repair helicase UVH6 (758 aa)
     
      0.939
BSD10
Putative RNA polymerase II transcription factor B subunit 1-1 (600 aa)
       
      0.938
pco103361
Cyclin-H1-1; Belongs to the cyclin family (168 aa)
       
      0.938
GRMZM2G147854_P01
RNA polymerase II transcription factor B subunit 2; Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA (451 aa)
       
      0.938
pco075430a
CDC2+/CDC28-related protein kinase R2; Putative cyclin-dependent kinase family protein; Uncharacterized protein ; Belongs to the protein kinase superfamily (428 aa)
       
      0.897
100273893
Putative cyclin-dependent kinase family protein ; Belongs to the protein kinase superfamily (429 aa)
       
      0.897
103636058
Pentatricopeptide repeat-containing protein (611 aa)
     
   
0.893
MURE
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic; Required for the activity of the plastid-encoded RNA polymerase (PEP) and full expression of genes transcribed by PEP. Required for the proper build-up and formation of the PEP-complex; Belongs to the MurCDEF family. MurE subfamily (760 aa)
     
   
  0.852
GRMZM2G428393_P01
annotation not available (399 aa)
     
   
  0.748
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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