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STRINGSTRING
atg18j protein (Zea mays) - STRING interaction network
"atg18j" - Autophagy-related protein 18a in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atg18jAutophagy-related protein 18a (304 aa)    
Predicted Functional Partners:
Atg7
Autophagy 7; Autophagy-related 7 (1021 aa)
     
 
  0.850
GRMZM2G426483_P01
Retrovirus-related Pol polyprotein LINE-1 (410 aa)
       
 
  0.749
GRMZM2G042889_P01
Retrovirus-related Pol polyprotein LINE-1 (1438 aa)
       
 
  0.749
atg6
Beclin 1 protein; Beclin-1-like protein (499 aa)
     
 
  0.684
103636340
Beclin-1-like protein (579 aa)
     
 
  0.684
100502331
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle (888 aa)
     
   
  0.652
GRMZM2G382673_P01
Retrovirus-related Pol polyprotein LINE-1; Thioredoxin-like protein 5; Uncharacterized protein (138 aa)
       
      0.635
100275976
Autophagy-related protein 101 (213 aa)
     
   
  0.602
atg5
Autophagy protein 5; Required for autophagy (374 aa)
           
  0.597
100191311
Syntaxin-41; Belongs to the syntaxin family (320 aa)
     
      0.585
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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