STRINGSTRING
GRMZM2G104070_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G104070_P01" - Ribose-5-phosphate isomerase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G104070_P01Ribose-5-phosphate isomerase (580 aa)    
Predicted Functional Partners:
GRMZM2G178960_P01
Ribulose-phosphate 3-epimerase (274 aa)
   
  0.974
GRMZM2G083102_P02
Ribulose-phosphate 3-epimerase (225 aa)
   
  0.974
csu1171
Hypothetical protein LOC100274365 (274 aa)
   
  0.974
GRMZM2G333054_P01
Annotation not available (182 aa)
   
  0.970
pgd3
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44); Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (507 aa)
   
 
  0.941
Zm.406
NADPH producing dehydrogenase of the oxidative pentose phosphate pathway ; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (480 aa)
   
 
  0.941
AW257883
Hypothetical protein LOC100279628 (396 aa)
   
 
  0.940
GRMZM2G038791_P01
Hypothetical protein LOC100272744 (399 aa)
   
 
  0.940
Zm.93739
Uncharacterized protein (111 aa)
       
  0.937
GRMZM2G463280_P02
Phosphoribulokinase (381 aa)
     
 
  0.935
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (10%) [HD]