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STRINGSTRING
pza00132 protein (Zea mays) - STRING interaction network
"pza00132" - Nuclear pore complex protein NUP54 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pza00132Nuclear pore complex protein NUP54 (445 aa)    
Predicted Functional Partners:
IDP257
Nuclear pore complex protein NUP62 (120 aa)
     
  0.997
GRMZM2G162329_P01
Nuclear pore complex protein NUP62 (569 aa)
     
 
  0.986
rs55622871
annotation not available (926 aa)
     
 
  0.986
GRMZM5G874366_P01
Uncharacterized protein (694 aa)
     
 
  0.984
103626805
annotation not available (1967 aa)
     
 
  0.978
100286267
Rae1-like protein (345 aa)
     
 
  0.977
100283675
Rae1-like protein; Uncharacterized protein (343 aa)
     
 
  0.977
GRMZM2G348675_P02
Nuclear pore complex protein NUP107 (1102 aa)
     
 
  0.972
GRMZM5G867767_P01
Nuclear pore complex protein NUP1 (364 aa)
     
 
  0.929
GRMZM5G826456_P01
annotation not available (603 aa)
     
 
  0.929
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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