STRINGSTRING
IPT4 protein (Zea mays) - STRING interaction network
"IPT4" - Isopentenyl transferase IPT4 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IPT4Isopentenyl transferase IPT4 (364 aa)    
Predicted Functional Partners:
GRMZM2G076936_P01
Hypothetical protein LOC100280269 (418 aa)
         
  0.940
GRMZM2G022904_P01
Putative uncharacterized protein (527 aa)
         
  0.940
HDR
Hypothetical protein LOC100383164 (462 aa)
       
  0.891
FPS
Farnesyl pyrophosphate synthase (FPP synthase)(FPS)(Farnesyl diphosphate synthase) [Includes Dimethylallyltranstransferase(EC 2.5.1.1);Geranyltranstransferase(EC 2.5.1.10)]; Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate (350 aa)
       
  0.824
GRMZM2G147721_P01
Hypothetical protein LOC100192004 (355 aa)
       
  0.824
ggps2
Putative geranylgeranyl pyrophosphate synthase 2 (441 aa)
       
  0.824
GRMZM2G098569_P01
Hypothetical protein LOC100273420 (355 aa)
       
  0.824
Zm.16585
Putative geranylgeranyl pyrophosphate synthase 3 (363 aa)
       
  0.824
ggps4
Putative geranylgeranyl pyrophosphate synthase 4 (343 aa)
       
  0.824
Zm.88065
Putative geranylgeranyl pyrophosphate synthase 1 (367 aa)
       
  0.824
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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