STRINGSTRING
nlp9 protein (Zea mays) - STRING interaction network
"nlp9" - Hypothetical protein LOC100191188 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlp9Hypothetical protein LOC100191188 (945 aa)    
Predicted Functional Partners:
CA5P2
Uncharacterized LOC103636395 (129 aa)
           
  0.546
CA5P1
Uncharacterized LOC103642208 (127 aa)
           
  0.546
GRMZM2G054210_P02
Hypothetical protein LOC100381886 (906 aa)
           
  0.546
GRMZM2G030144_P01
Hypothetical protein LOC100193027 (867 aa)
           
  0.546
Zm.87220
AP-1 complex subunit gamma-2 (868 aa)
           
  0.546
pco107491b
Hypothetical protein LOC100383591 (969 aa)
           
  0.459
grf2
14-3-3-like protein GF14-12 (900 aa)
           
  0.459
Zm.51985
AP-4 complex subunit epsilon-like (585 aa)
           
  0.459
AC189766.3_FGP001
Annotation not available (273 aa)
           
  0.459
GRAS74
GRAS transcription factor (535 aa)
           
  0.407
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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