STRINGSTRING
pco124475 protein (Zea mays) - STRING interaction network
"pco124475" - GAST1 protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco124475GAST1 protein; Uncharacterized protein (114 aa)    
Predicted Functional Partners:
541803
Cellulose synthase-5 ; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily (1076 aa)
     
   
  0.816
cl22897_1a
GASA-like protein; Gibberellin-regulated protein 1; Uncharacterized protein (115 aa)
           
  0.808
103637710
annotation not available (1579 aa)
           
  0.721
103629382
RING/FYVE/PHD zinc finger superfamily protein (1147 aa)
           
  0.721
103638903
RING/FYVE/PHD zinc finger superfamily protein (1525 aa)
           
  0.721
GRMZM2G356273_P01
Putative uncharacterized protein (135 aa)
           
  0.703
100193290
Alpha-expansin 13; Uncharacterized protein (258 aa)
           
  0.703
100191303
Expansin-A13 (260 aa)
           
  0.703
GRMZM2G445261_P01
annotation not available (299 aa)
           
  0.657
103649747
annotation not available (339 aa)
           
  0.657
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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