STRINGSTRING
pco146189 protein (Zea mays) - STRING interaction network
"pco146189" - LOC100281827 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco146189LOC100281827 (203 aa)    
Predicted Functional Partners:
GRMZM2G353103_P01
40S ribosomal protein S16Putative uncharacterized protein ; (149 aa)
     
        0.786
GRMZM2G376727_P03
Translocon-associated protein beta containing protein (193 aa)
     
        0.584
cl3204_1
LOC100283111 (334 aa)
     
 
  0.572
cl12353_1
LOC100283825 (190 aa)
     
   
  0.559
SPT16
FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16)(Global transcription factor group C protein 102); Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the di [...] (1055 aa)
           
  0.547
Zm.97159
50S ribosomal protein L27Putative uncharacterized protein ; (146 aa)
           
  0.545
pcr1
Protochlorophyllide reductase A (387 aa)
       
      0.542
por
Protochlorophyllide reductase B (396 aa)
       
      0.542
GRMZM2G036455_P01
Protochlorophyllide reductase B (396 aa)
       
      0.542
GRMZM2G043983_P01
Mitochondrial import receptor subunit TOM40 (333 aa)
     
 
  0.541
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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