STRINGSTRING
pco077228 protein (Zea mays) - STRING interaction network
"pco077228" - Geranylgeranyl hydrogenase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco077228Geranylgeranyl hydrogenase (457 aa)    
Predicted Functional Partners:
cl627_1
Hypothetical protein LOC100280305 (423 aa)
 
 
  0.966
ggps2
Putative geranylgeranyl pyrophosphate synthase 2 (441 aa)
   
  0.964
Zm.16585
Putative geranylgeranyl pyrophosphate synthase 3 (363 aa)
   
  0.964
Zm.88065
Putative geranylgeranyl pyrophosphate synthase 1 (367 aa)
   
  0.964
GRMZM2G496833_P01
Annotation not available (124 aa)
   
  0.954
GRMZM2G163809_P02
Prenyl transferase (420 aa)
   
  0.954
ggps4
Putative geranylgeranyl pyrophosphate synthase 4 (343 aa)
   
  0.954
GRMZM2G081462_P01
Hypothetical protein LOC100384675 (LOC100384675), mRNA (408 aa)
 
 
  0.952
GRMZM2G043109_P01
Uncharacterized protein (290 aa)
 
 
  0.952
GRMZM2G410644_P01
Uncharacterized LOC100192568 (383 aa)
       
  0.922
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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