STRINGSTRING
Zm.126244 protein (Zea mays) - STRING interaction network
"Zm.126244" - NHL25 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.126244NHL25 (265 aa)    
Predicted Functional Partners:
Zm.13244
Serine acetyltransferase2 (314 aa)
           
  0.710
MYB62
Hypothetical protein LOC100272853 (306 aa)
           
  0.576
bHLH137
Hypothetical protein LOC100194106 (364 aa)
           
  0.566
PYL6
Hypothetical protein LOC100383409 (253 aa)
           
  0.561
IPT5
Isopentenyl transferase IPT5 (337 aa)
           
  0.561
CNR8
Hypothetical protein LOC100194102 (676 aa)
           
  0.530
Zm.18022
Barley mlo defense gene homolog1 ; May be involved in modulation of pathogen defense and leaf cell death (563 aa)
           
  0.529
Zm.38616
Defence-related protein (inra2(prp)), mRNA (219 aa)
           
  0.526
expA1
Alpha expansin1 (253 aa)
           
  0.522
LOX5
Lipoxygenase ; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (887 aa)
           
  0.522
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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