STRINGSTRING
GRMZM2G107679_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G107679_P01" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G107679_P01Uncharacterized protein (308 aa)    
Predicted Functional Partners:
GRMZM2G301553_P01
Uncharacterized protein (487 aa)
   
 
  0.846
umc2770
Hypothetical protein LOC100383569 (545 aa)
   
   
  0.845
Zm.2572
Uncharacterized protein (802 aa)
   
   
  0.827
Zm.151704
Probable methionine--tRNA ligase (802 aa)
   
   
  0.827
Zm.20172
Probable methionine--tRNA ligase (801 aa)
   
   
  0.827
Zm.12595
Putative leucyl-tRNA synthetase Fragment (815 aa)
   
 
  0.816
Zm.123953
leucine--tRNA ligase, cytoplasmic-like (1090 aa)
   
 
  0.816
AC216819.2_FGP005
Annotation not available (213 aa)
   
 
  0.816
GRMZM5G858471_P01
Uncharacterized protein (122 aa)
   
 
  0.804
Zm.5368
Putative leucine--tRNA ligase, mitochondrial (343 aa)
   
 
  0.804
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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