STRINGSTRING
sqs1 protein (Zea mays) - STRING interaction network
"sqs1" - Squalene synthase1 in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sqs1Squalene synthase1 (401 aa)    
Predicted Functional Partners:
FPS
Farnesyl pyrophosphate synthase (FPP synthase)(FPS)(Farnesyl diphosphate synthase) [Includes Dimethylallyltranstransferase(EC 2.5.1.1);Geranyltranstransferase(EC 2.5.1.10)]; Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate (350 aa)
   
  0.987
pco148653
LOC100285558 (534 aa)
   
 
  0.970
GRMZM2G091456_P02
Hypothetical protein LOC100274333 (530 aa)
   
 
  0.963
GRMZM2G147721_P01
Hypothetical protein LOC100192004 (355 aa)
   
  0.958
GRMZM2G098569_P01
Hypothetical protein LOC100273420 (355 aa)
   
  0.958
Zm.84184
Hypothetical protein LOC100193755 (479 aa)
     
 
  0.928
Zm.28059
3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2-like (572 aa)
     
 
  0.928
GRMZM2G149224_P01
Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating (552 aa)
     
 
  0.928
Zm.125982
Uncharacterized protein (908 aa)
     
 
  0.928
GRMZM2G007252_P01
Hypothetical protein LOC100383338 (376 aa)
     
 
  0.928
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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