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STRINGSTRING
pco104916 protein (Zea mays) - STRING interaction network
"pco104916" - Mitosis protein dim1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco104916Mitosis protein dim1 (142 aa)    
Predicted Functional Partners:
GRMZM2G057394_P02
ATP-dependent RNA helicase DDX23; Uncharacterized protein ; Belongs to the DEAD box helicase family (758 aa)
       
 
  0.987
100280668
WW domain-containing protein; Protein binding protein; Uncharacterized protein (492 aa)
     
 
  0.978
107275236
C2H2 and C2HC zinc fingers superfamily protein (201 aa)
     
 
  0.975
100276763
CD2-binding protein-related (423 aa)
     
 
  0.966
IDP2400
Inactive protein FRIGIDA (284 aa)
     
 
  0.961
103640981
Protein STABILIZED1 (956 aa)
     
 
  0.957
GRMZM2G049902_P01
annotation not available (962 aa)
     
 
  0.957
100286213
Sm-like protein LSM5; SAD1; SAD1 isoform 1; SAD1 isoform 2; Uncharacterized protein (137 aa)
     
 
  0.951
100283319
SAD1; SAD1 isoform 1; SAD1 isoform 2; Uncharacterized protein (88 aa)
     
 
  0.951
GRMZM2G386811_P01
annotation not available (67 aa)
     
 
  0.950
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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