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STRINGSTRING
umc1301 protein (Zea mays) - STRING interaction network
"umc1301" - Isopentenyl pyrophosphate isomerase in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
Databases
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[Homology]
Score
umc1301Isopentenyl pyrophosphate isomerase; Isopentenyl-diphosphate delta-isomerase II; Uncharacterized protein (219 aa)    
Predicted Functional Partners:
IDP726
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids (420 aa)
   
 
  0.988
103643980
Diphosphomevalonate decarboxylase MVD2 (1460 aa)
   
 
  0.986
pco067553
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Uncharacterized protein (462 aa)
         
  0.983
pco148653
Squalene monooxygenase (534 aa)
     
   
  0.945
GRMZM2G091456_P02
Squalene epoxidase 1 (530 aa)
     
   
  0.945
fps1
Farnesyl pyrophosphate synthase; Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate (350 aa)
   
 
  0.890
fps2
Farnesyl diphosphate synthase2; Belongs to the FPP/GGPP synthase family (355 aa)
   
 
  0.890
100273420
Farnesyl diphosphate synthase3; Belongs to the FPP/GGPP synthase family (355 aa)
   
 
  0.890
100285783
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase (464 aa)
   
   
  0.877
pco130633
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase (470 aa)
   
   
  0.877
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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