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STRINGSTRING
atg13b protein (Zea mays) - STRING interaction network
"atg13b" - Autophagy-related protein 13a in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atg13bAutophagy-related protein 13a (533 aa)    
Predicted Functional Partners:
103634282
annotation not available (743 aa)
     
  0.992
100275976
Autophagy-related protein 101 (213 aa)
     
  0.992
100502331
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle (888 aa)
     
 
  0.979
100382597
Serine/threonine-protein kinase ATG1c (704 aa)
     
  0.973
Atg7
Autophagy 7; Autophagy-related 7 (1021 aa)
     
 
  0.961
103654871
Putative autophagy domain family protein (1139 aa)
     
  0.953
umc2637
Autophagy-related protein 11 (1143 aa)
     
  0.953
Atg4a
Cysteine protease; Autophagy-related 4 variant 1; Cysteine protease ATG4B; Uncharacterized protein (492 aa)
     
 
  0.897
gpm907b
Serine/threonine-protein kinase ATG1a (538 aa)
     
 
  0.893
Atg4b
Cysteine protease; Autophagy 4b variant 3; Uncharacterized protein (492 aa)
     
 
  0.891
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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