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STRINGSTRING
umc1539 protein (Zea mays) - STRING interaction network
"umc1539" - Selenoprotein family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1539Selenoprotein family protein (177 aa)    
Predicted Functional Partners:
cl33987_1
Transmembrane emp24 domain-containing protein 10 (207 aa)
     
        0.836
pco081417
Transmembrane emp24 domain-containing protein p24delta9 (268 aa)
     
        0.836
100273431
Transmembrane emp24 domain-containing protein 10; Uncharacterized protein (211 aa)
     
        0.836
cl15300_1
Transmembrane emp24 domain-containing protein 10 (210 aa)
     
        0.836
GRMZM2G114033_P01
Transmembrane emp24 domain-containing protein 10 (222 aa)
     
        0.836
100217126
Transmembrane emp24 domain-containing protein 10; Uncharacterized protein (229 aa)
     
        0.836
GRMZM5G846198_P02
annotation not available (417 aa)
       
 
  0.776
GRMZM2G370162_P02
annotation not available (546 aa)
       
 
  0.776
GRMZM2G158595_P01
UPF0061 protein azo1574 (630 aa)
           
  0.760
100217212
Multifunctional methyltransferase subunit TRM112-like protein (131 aa)
     
   
  0.716
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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