• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
nlp7 protein (Zea mays) - STRING interaction network
"nlp7" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlp7annotation not available (953 aa)    
Predicted Functional Partners:
TCP20
Transcription factor TCP11 (315 aa)
           
  0.555
GRAS61
annotation not available (564 aa)
           
  0.515
100193471
annotation not available (566 aa)
           
  0.480
103647969
annotation not available (623 aa)
           
  0.480
GRMZM2G131749_P01
LRR receptor-like serine/threonine-protein kinase GSO1 (977 aa)
           
  0.478
GRAS74
GRAS transcription factor; Belongs to the GRAS family (535 aa)
           
  0.455
103634387
annotation not available (545 aa)
           
  0.455
103636180
annotation not available (526 aa)
           
  0.455
gras59
Scarecrow-like protein 29 (294 aa)
           
  0.455
103645852
annotation not available (722 aa)
           
  0.400
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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