STRINGSTRING
csu471 protein (Zea mays) - STRING interaction network
"csu471" - Hypothetical protein LOC100193128 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csu471Hypothetical protein LOC100193128 (363 aa)    
Predicted Functional Partners:
Zm.7885
Hypothetical protein LOC100383498 (494 aa)
           
  0.721
csu193
Hypothetical protein LOC100191649 (382 aa)
           
  0.721
IBP2
Initiator-binding protein 2Putative uncharacterized protein ; (684 aa)
           
  0.629
Zm.6197
Hypothetical protein LOC100191947 ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (250 aa)
           
  0.529
cenH3
Centromeric histone H3 (157 aa)
           
  0.524
GRMZM2G024389_P02
Hypothetical protein LOC100191639 (290 aa)
   
          0.520
GRMZM2G468702_P01
Photosystem II reaction center Psb28 protein (260 aa)
   
          0.501
GRMZM2G056424_P01
Photosystem II 11 kD protein (170 aa)
   
          0.498
Zm.80957
Photosystem II 11 kD protein (167 aa)
   
          0.496
GRMZM2G052588_P01
Annotation not available (103 aa)
   
          0.485
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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